Applied and Interdisciplinary Mathematics Seminar

University of Michigan

Winter 2006
Friday, 24 Feb, 3:10-4:00pm, 1084 East Hall

Synthetic genetic systems as model systems for quantitative studies of genetic regulation.

Alex Ninfa and Daniel Forger

University of Michigan


Abstract

Natural genetic systems display interesting behaviors such as oscillations (circadian clocks) and bistability (development), but quantitative studies of these systems is rendered difficult by their complexity and our lack of complete knowledge of system topology and parameters. To circumvent this difficulty, we are developing simple model systems that display interesting behaviors, constructed from well known transcriptional regulators. In these simple systems, the topology is known at the outset and all parameters are known to some degree. We will discuss a system showing bistability (a toggle switch) and a genetic oscillator (clock). The modeling, construction, characterization and ongoing development of the model systems will be discussed. We hope to use these simple model systems to elucidate important system design principles associated with bistability and oscillatory behavior.