From dburns@umich.edu Fri Mar 26 08:31:05 2004
Date: Fri, 26 Mar 2004 08:30:23 -0500 (EST)
From: Dan Burns <dburns@umich.edu>
To: Jayson Falkner <jfalkner@umich.edu>
Cc: 1079702072469-977433 <1079702072469-977433@ctng.ummu.umich.edu>
Subject: Re: Influenzae code/data

Yes, students can put files in directly, or so I thought: if you can enter
(go through the linkon the 548 Labsheets page), go to Math 548 001, and
click "Resources" on the left hand side navigation bar. Then, say you have
H. influenzae CH genes data to enter, you would click until you got down
into that directory (so, through PHX Data --> H. influenzae data --> Chap
Data). Once there, click "new", and you get to choose, e.g., to dump a
file local to your computer, which would be the typical way to do this. (I
forget, but I think there is a cut-and-paste option, if you wish.)

I have deposited several contributions form Jayson tothe H. influenzae
project. Note also that his Java script is available for stripping genes
from GenBank files. Check the format he is using, which is a natural and
useful one (1 gene = 2 lines, one Fasta comment line, and one (long,
unbroken) line of sequence.

					See you soon,
					DB


On Thu, 25 Mar 2004, Jayson Falkner wrote:

> Can students put files in the resources section of the course website? I
> just realized I should probably upload my data before class, but I
> couldn't figure out how.
>
> E-mail is cached by the site, so for now I'll just attach the data to
> this e-mail.
>
> If anyone knows how to upload data to the folders Dr. Burns created,
> please give me a heads up.
>
> Jayson Falkner
> jfalkner@umich.edu
> [see attachment: "influenzae-data.zip", size: 32214 bytes]
>
>
> Attachments:
>
> https://ctng.ummu.umich.edu/ctng/access/content/attachment/1080275031626-1005314/influenzae-data.zip
>
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